miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|261506157|gb|GT191881.1|GT191881 TTTTGCCAAAATACAAATTATGTTTATTTACATGTTTATTTCTTATTCTTCTATAATAAATACAGATTCCACCAAGACAT
GTGTTTTATTACAATAAAACTACAGACATTGGGAGAAAAATGTTTAATGCGTTTTTTTCCGATCTTAACTGATTTAAATA
ATGTTTAATTGTTTCTATAATGTACAACTACAATTGTTTACACCCTAAGCCAGTACATTCCAGCGCGGATCCTAGTGTAG
TCTGGCAGTGCTTCAGTAGGCCCAACGGTGGCCACAGCGGGGCAGCGGTCGTACAGGTACTTGTAGCACACATCACGCAC
ATTCTGCACAGAGACAGCTTCAATACGGGCATCAAGCTCATGGATGGGGATGCGACGGTTGTAGCACAACATTTGACGAC
CAATGTCTTCACACACAGGGGTGGTGCCGTCCAGTTGAAGAAGCATGTTGGTCTTGAGGAGGTTCCTGGCACGCTCAAAC
TCACCCTCAGTGACTGATGTGCAGAGCTTCATCCACTCCTTCTGGACATTGTACAGCATATCTTCCAACTGCATGGGTTT
CAGCTACAAGTAAATGCCCCAAGTCCAGTGTCCTTGTAGCATGTGTTGA




Most similar to sp|Q5REK3|MPPB_PONAB

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|Q5REK3|MPPB_PONAB Mitochondrial-processing peptidase subunit
           beta OS=Pongo abelii GN=PMPCB PE=2 SV=1
          Length = 489

 Score =  187 bits (474), Expect = 6e-47
 Identities = 85/126 (67%), Positives = 105/126 (83%)
 Frame = -2

Query: 581 WGIYL*LKPMQLEDMLYNVQKEWMKLCTSVTEGEFERARNLLKTNMLLQLDGTTPVCEDI 402
           WG+Y+  +P  + DML+ VQKEWM+LCTSVTE E  RARNLLKTNMLLQLDG+TP+CEDI
Sbjct: 363 WGLYMVCEPSTVADMLHVVQKEWMRLCTSVTESEVARARNLLKTNMLLQLDGSTPICEDI 422

Query: 401 GRQMLCYNRRIPIHELDARIEAVSVQNVRDVCYKYLYDRCPAVATVGPTEALPDYTRIRA 222
           GRQMLCYNRRIPI EL+ARI+AV+ + +R+VC KY+Y+R PA+A VGP E LPD+ +I +
Sbjct: 423 GRQMLCYNRRIPIPELEARIDAVNAETIREVCTKYIYNRSPAIAAVGPIEQLPDFKQICS 482

Query: 221 GMYWLR 204
            M WLR
Sbjct: 483 NMCWLR 488